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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199786727_199791581_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199786727 - 199791581

Intron Length:

4855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAG

U12 Branch Point Sequence:

TAATCCGAGATT

Flanking Amino Acid:

PDRKGKGTSEGKPSSFFPDD

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

70.6

42.2

Major BPS

61.8

0.29

1.5

69.7

35.5

Major PPT

76.1

0.59

72.9

42.2

Minor 5ss

39.3

-1.2

3.5

55.1

49.1

Minor BPS

46.8

-0.1

2.3

68.22

43.1

Associated Gene:

Gene:

TENM4

Ensembl Gene ID:

ENSAPLG00000004223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031543

199616293 - 199834006

217714

ENSAPLT00000027228

199616293 - 200105239

488947

ENSAPLT00000019353

199616293 - 199999435

383143

ENSAPLT00000048225

199616293 - 199999435

383143

ENSAPLT00000004388

199616293 - 200105239

488947

ENSAPLT00000040747

199616293 - 200105239

488947