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Intron Name: Anas_platyrhynchos_platyrhynchos_1_199791753_199812320_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

199791753 - 199812320

Intron Length:

20568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCCTA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCACCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTTTCTCATTG

Flanking Amino Acid:

TLVILLAYFIAMHLFGLNWH

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

72.3

0.5

0.9

66.1

34.5

Minor 5ss

41.4

-1

3.1

56.1

Minor BPS

49.3

-0.1

1.9

58.64

43.9

Associated Gene:

Gene:

TENM4

Ensembl Gene ID:

ENSAPLG00000004223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027228

199616293 - 200105239

488947

ENSAPLT00000019353

199616293 - 199999435

383143

ENSAPLT00000048225

199616293 - 199999435

383143

ENSAPLT00000004388

199616293 - 200105239

488947

ENSAPLT00000040747

199616293 - 200105239

488947

ENSAPLT00000031543

199616293 - 199834006

217714