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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20006238_20035373_R

Intron Information:

Intron Rank:

137227

Intron Class:

major

Intron Phase:

Intron Coordinates:

20006238 - 20035373

Intron Length:

29136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TAATAGTTACAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.8

38.3

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

42.2

-0.5

2.4

55.89

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021327

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043027

20006142 - 20035514

29373