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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20040438_20042262_R

Intron Information:

Intron Rank:

131752

Intron Class:

major

Intron Phase:

Intron Coordinates:

20040438 - 20042262

Intron Length:

1825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTTGA

5'SS Class:

major

3'SS Sequence:

CTTTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCCTCTTCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.3

67.6

40.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

91.3

0.93

0.6

84.1

30.8

Minor 5ss

41.1

-1

2.6

50.4

45.9

Minor BPS

44.8

-0.3

3.7

84.68

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040851

20040160 - 20067628

27469

ENSAPLT00000038259

20040160 - 20056314

16155

ENSAPLT00000032121

20037181 - 20042343

5163