Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_201089786_201091766_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

201089786 - 201091766

Intron Length:

1981

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCGTATTAA

5'SS Class:

weak_major

3'SS Sequence:

ATGTTGCCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAG

U12 Branch Point Sequence:

GTGACCAAAGCA

Flanking Amino Acid:

IAVLFFIILIISMCIVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.2

32.9

Major BPS

56.5

0.16

1.6

40.9

Major PPT

73.1

0.52

63.1

43.6

Minor 5ss

30.9

-2.2

3.9

38.6

41.5

Minor BPS

42.5

-0.5

2.1

54.04

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000670

201088863 - 201091788

2926