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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201320586_201321264_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

201320586 - 201321264

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTACGAGGG

5'SS Class:

weak_major

3'SS Sequence:

ACGATCCTACAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

TGCACCCCAAAT

Flanking Amino Acid:

SAGDGVKRGWDPARSLLGSI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.1

45.6

43.1

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

49.9

-0

1.1

46.7

Minor 5ss

-2.3

3.5

34.1

42.7

Minor BPS

45.9

-0.2

64.46

44.8

Associated Gene:

Gene:

PLEKHB1

Ensembl Gene ID:

ENSAPLG00000030939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045721

201320515 - 201326001

5487