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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201340571_201341811_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201340571 - 201341811

Intron Length:

1241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTAAG

5'SS Class:

major

3'SS Sequence:

CTCCCACCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GCTTTTTTAATT

Flanking Amino Acid:

SKTMYLEDRTIRLQLWDTAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

68.1

38.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.6

0.42

0.8

61.1

Minor 5ss

31.8

-2.1

2.7

40.2

Minor BPS

72.7

0.79

1.1

79.54

37.3

Associated Gene:

Gene:

RAB6A

Ensembl Gene ID:

ENSAPLG00000027812

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036403

201335789 - 201345954

10166