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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201378178_201378555_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201378178 - 201378555

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGAGCT

5'SS Class:

major

3'SS Sequence:

TTTGTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAGCAC

U12 Branch Point Sequence:

GACGACGGAACT

Flanking Amino Acid:

IWQAANGEIRRLLEGHVYDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

66.2

Major BPS

46.4

-0.2

1.4

55.1

40.4

Major PPT

91.6

0.94

0.7

84.6

Minor 5ss

34.3

-1.8

3.5

45.4

43.3

Minor BPS

40.9

-0.6

2.2

55.78

45.6

Associated Gene:

Gene:

PAAF1

Ensembl Gene ID:

ENSAPLG00000007787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008086

201370974 - 201383228

12255