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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201379883_201380223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201379883 - 201380223

Intron Length:

341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGGAGC

5'SS Class:

major

3'SS Sequence:

GTCCTCTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

ATTGCTGGAGCT

Flanking Amino Acid:

VNLGAPEKTPSEREIGTEGK

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.1

41.2

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

71.5

0.48

64.9

41.3

Minor 5ss

29.4

-2.4

3.1

39.6

40.2

Minor BPS

43.4

-0.4

2.3

66.82

44.1

Associated Gene:

Gene:

PAAF1

Ensembl Gene ID:

ENSAPLG00000007787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008086

201370974 - 201383228

12255