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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201381983_201383150_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201381983 - 201383150

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

CTGTGCTTAAAT

Flanking Amino Acid:

TEADCDPVYKVASWEKQIYT

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

0.5

1.1

76.9

32.8

Major PPT

94.5

0.5

93.1

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

0.42

1.9

76.84

45.5

Associated Gene:

Gene:

PAAF1

Ensembl Gene ID:

ENSAPLG00000007787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008086

201370974 - 201383228

12255