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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201385847_201385939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201385847 - 201385939

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

CCTCGTCCCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

AATTACAAAACG

Flanking Amino Acid:

LAEAYDVLGDPVKRGVYDRF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.3

66.2

39.6

Major BPS

0.3

62.3

30.4

Major PPT

66.5

0.37

0.8

57.8

33.3

Minor 5ss

31.7

-2.1

3.3

46.2

42.2

Minor BPS

46.5

-0.4

2.1

57.4

43.4

Associated Gene:

Gene:

DNAJB13

Ensembl Gene ID:

ENSAPLG00000016880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018016

201384508 - 201388221

3714