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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201386106_201387070_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

201386106 - 201387070

Intron Length:

965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGGGGGCT

5'SS Class:

major

3'SS Sequence:

ATTCTTCTCCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTCCTCTCACCC

Flanking Amino Acid:

FFGGENPFSGMTAPRWSCPT

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.1

60.4

35.5

Major BPS

72.7

0.56

30.1

Major PPT

59.3

0.21

1.7

65.9

40.3

Minor 5ss

27.4

-2.6

3.8

42.3

Minor BPS

46.4

-0.2

1.8

55.1

43.3

Associated Gene:

Gene:

DNAJB13

Ensembl Gene ID:

ENSAPLG00000016880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018016

201384508 - 201388221

3714