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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201393219_201399759_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201393219 - 201399759

Intron Length:

6541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTACG

5'SS Class:

major

3'SS Sequence:

CTTCTCTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

GGCTCTAAAATT

Flanking Amino Acid:

MLSISSRPSTSRHGAALGGI

Intron Amino Acid Position:

2298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.4

41.2

Major BPS

0.57

73.6

28.6

Major PPT

80.7

0.69

0.7

31.8

Minor 5ss

38.2

-1.3

2.7

49.6

40.1

Minor BPS

46.6

-0.1

1.9

61.89

42.5

Associated Gene:

Gene:

C2CD3

Ensembl Gene ID:

ENSAPLG00000007182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038297

201392301 - 201439805

47505