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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201401292_201402788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201401292 - 201402788

Intron Length:

1497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTAATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TTTCTATTAATC

Flanking Amino Acid:

LVSQVSNLINDLQTITKNSK

Intron Amino Acid Position:

1928

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

41.1

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

74.4

0.55

74.7

38.8

Minor 5ss

39.7

-1.2

2.8

46.4

44.2

Minor BPS

66.2

0.49

1.5

76.75

32.7

Associated Gene:

Gene:

C2CD3

Ensembl Gene ID:

ENSAPLG00000007182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038297

201392301 - 201439805

47505

ENSAPLT00000035969

201397185 - 201439805

42621

ENSAPLT00000007477

201396786 - 201439805

43020

ENSAPLT00000007464

201393637 - 201439805

46169

ENSAPLT00000044891

201396618 - 201439805

43188