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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201404129_201404964_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201404129 - 201404964

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTCAA

5'SS Class:

major

3'SS Sequence:

TGGTTAAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATGGTTAAAT

Flanking Amino Acid:

SKEVSVPTRELPVPSRINSP

Intron Amino Acid Position:

1796

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

67.5

39.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

62.8

0.29

56.9

42.7

Minor 5ss

36.4

-1.5

51.1

45.2

Minor BPS

49.9

0.07

2.5

78.07

43.9

Associated Gene:

Gene:

C2CD3

Ensembl Gene ID:

ENSAPLG00000007182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035969

201397185 - 201439805

42621

ENSAPLT00000007477

201396786 - 201439805

43020

ENSAPLT00000007464

201393637 - 201439805

46169

ENSAPLT00000044891

201396618 - 201439805

43188

ENSAPLT00000038297

201392301 - 201439805

47505