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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201405066_201405502_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201405066 - 201405502

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTATGTACC

5'SS Class:

major

3'SS Sequence:

CTCTTTATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTCTCTTTATT

Flanking Amino Acid:

RIRTQTPNSSVKESFPVSPS

Intron Amino Acid Position:

1763

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

65.6

38.5

Major BPS

83.9

0.84

73.9

41.3

Major PPT

84.7

0.78

0.8

77.1

35.8

Minor 5ss

45.3

-0.5

2.4

37.1

Minor BPS

67.4

0.63

1.6

85.04

35.1

Associated Gene:

Gene:

C2CD3

Ensembl Gene ID:

ENSAPLG00000007182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038297

201392301 - 201439805

47505

ENSAPLT00000035969

201397185 - 201439805

42621

ENSAPLT00000007477

201396786 - 201439805

43020

ENSAPLT00000007464

201393637 - 201439805

46169

ENSAPLT00000044891

201396618 - 201439805

43188