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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201412546_201413194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201412546 - 201413194

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

AATTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TGTTTGTGAATT

Flanking Amino Acid:

ERSRATLSVGGVYPLFRCNA

Intron Amino Acid Position:

1519

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

80.8

0.69

0.8

74.2

35.5

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

53.3

0.18

2.1

77.06

39.7

Associated Gene:

Gene:

C2CD3

Ensembl Gene ID:

ENSAPLG00000007182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007477

201396786 - 201439805

43020

ENSAPLT00000007464

201393637 - 201439805

46169

ENSAPLT00000044891

201396618 - 201439805

43188

ENSAPLT00000038297

201392301 - 201439805

47505

ENSAPLT00000035969

201397185 - 201439805

42621