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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201413816_201415179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201413816 - 201415179

Intron Length:

1364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCAG

5'SS Class:

major

3'SS Sequence:

TCTTCTCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TAATGATGATCT

Flanking Amino Acid:

PTRDLLRRRSGITGWYPVTL

Intron Amino Acid Position:

1312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

62.4

43.6

Major BPS

85.7

0.89

0.8

22.2

Major PPT

74.8

0.56

75.8

26.7

Minor 5ss

30.2

-2.3

3.2

38.2

46.7

Minor BPS

43.3

-0.4

2.2

64.6

44.9

Associated Gene:

Gene:

C2CD3

Ensembl Gene ID:

ENSAPLG00000007182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007477

201396786 - 201439805

43020

ENSAPLT00000007464

201393637 - 201439805

46169

ENSAPLT00000044891

201396618 - 201439805

43188

ENSAPLT00000038297

201392301 - 201439805

47505

ENSAPLT00000035969

201397185 - 201439805

42621