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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201416404_201417634_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

201416404 - 201417634

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACCT

5'SS Class:

strong_major

3'SS Sequence:

ATACTAAATGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTCTTTTCACA

Flanking Amino Acid:

HRAAGLQAAARAVAEKNPSV

Intron Amino Acid Position:

1192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.4

38.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

52.5

0.06

1.2

51.6

40.4

Minor 5ss

-1.8

3.3

49.1

46.6

Minor BPS

61.7

0.36

1.7

75.92

35.5

Associated Gene:

Gene:

C2CD3

Ensembl Gene ID:

ENSAPLG00000007182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038297

201392301 - 201439805

47505

ENSAPLT00000035969

201397185 - 201439805

42621

ENSAPLT00000007477

201396786 - 201439805

43020

ENSAPLT00000007464

201393637 - 201439805

46169

ENSAPLT00000044891

201396618 - 201439805

43188