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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201417750_201418869_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201417750 - 201418869

Intron Length:

1120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TCACTGAATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

CTTTCTTTCACT

Flanking Amino Acid:

SSEEFHLRSSGLLDVSVRYH

Intron Amino Acid Position:

1154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.7

Major BPS

77.7

0.69

30.2

Major PPT

64.7

0.33

55.2

43.6

Minor 5ss

26.2

-2.7

2.9

29.6

43.4

Minor BPS

71.8

0.77

1.7

87.23

Associated Gene:

Gene:

C2CD3

Ensembl Gene ID:

ENSAPLG00000007182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038297

201392301 - 201439805

47505

ENSAPLT00000035969

201397185 - 201439805

42621

ENSAPLT00000007477

201396786 - 201439805

43020

ENSAPLT00000007464

201393637 - 201439805

46169

ENSAPLT00000044891

201396618 - 201439805

43188