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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201424032_201424948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201424032 - 201424948

Intron Length:

917

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TAAACTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TCATTCTAAATT

Flanking Amino Acid:

TTQPAFNFSQVMPFSLTSKH

Intron Amino Acid Position:

843

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.7

81.1

36.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

72.7

0.51

62.6

43.6

Minor 5ss

24.2

-3

3.7

34.7

41.7

Minor BPS

62.8

0.48

1.7

75.74

41.7

Associated Gene:

Gene:

C2CD3

Ensembl Gene ID:

ENSAPLG00000007182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038297

201392301 - 201439805

47505

ENSAPLT00000035969

201397185 - 201439805

42621

ENSAPLT00000007477

201396786 - 201439805

43020

ENSAPLT00000007464

201393637 - 201439805

46169

ENSAPLT00000044891

201396618 - 201439805

43188