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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201434125_201435674_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201434125 - 201435674

Intron Length:

1550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCTTG

5'SS Class:

major

3'SS Sequence:

GCTTGTTAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

TTTCCTTTTACT

Flanking Amino Acid:

VETDGFKAAAKSPNILNSDF

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

72.5

39.9

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

66.2

0.37

1.1

59.1

45.3

Minor 5ss

49.2

-0

2.8

64.9

40.8

Minor BPS

72.7

0.8

1.6

89.79

Associated Gene:

Gene:

C2CD3

Ensembl Gene ID:

ENSAPLG00000007182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035969

201397185 - 201439805

42621

ENSAPLT00000007477

201396786 - 201439805

43020

ENSAPLT00000007464

201393637 - 201439805

46169

ENSAPLT00000044891

201396618 - 201439805

43188

ENSAPLT00000038297

201392301 - 201439805

47505