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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201455467_201455943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201455467 - 201455943

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

CATTTGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTGAA

U12 Branch Point Sequence:

TTCTACTACACG

Flanking Amino Acid:

LGLCMIDVVEGTAMDALNSM

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

72.7

44.5

Major BPS

55.5

0.14

1.1

47.1

37.9

Major PPT

72.5

0.51

69.5

41.3

Minor 5ss

41.5

-0.9

3.1

55.8

48.4

Minor BPS

46.7

-0.4

2.3

59.76

47.8

Associated Gene:

Gene:

PPME1

Ensembl Gene ID:

ENSAPLG00000006631

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032428

201444928 - 201461899

16972

ENSAPLT00000028571

201440071 - 201461899

21829

ENSAPLT00000006929

201447297 - 201461899

14603

ENSAPLT00000044700

201444928 - 201461899

16972