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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201459539_201460567_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201459539 - 201460567

Intron Length:

1029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TCCCTTTGAATC

Flanking Amino Acid:

HAVHEDAPDKVAEAVATFLI

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

33.5

Major BPS

74.6

0.61

1.4

34.5

Major PPT

79.3

0.66

0.7

77.7

24.3

Minor 5ss

-1

56.7

47.6

Minor BPS

49.7

-0

1.4

55.41

37.6

Associated Gene:

Gene:

PPME1

Ensembl Gene ID:

ENSAPLG00000006631

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032428

201444928 - 201461899

16972

ENSAPLT00000028571

201440071 - 201461899

21829

ENSAPLT00000006929

201447297 - 201461899

14603

ENSAPLT00000044700

201444928 - 201461899

16972