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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201531754_201532854_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201531754 - 201532854

Intron Length:

1101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TTTCACTGGACT

Flanking Amino Acid:

VPDSCCQVCKDGSYEKSAEE

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

93.6

0.98

0.6

89.1

19.8

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

61.1

0.43

1.7

83.21

37.1

Associated Gene:

Gene:

CHRDL2

Ensembl Gene ID:

ENSAPLG00000005779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045149

201523393 - 201545005

21613

ENSAPLT00000036039

201521773 - 201545005

23233

ENSAPLT00000005980

201523393 - 201539711

16319