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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201532911_201534131_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201532911 - 201534131

Intron Length:

1221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTACGTGAC

5'SS Class:

major

3'SS Sequence:

TGCCTGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAG

U12 Branch Point Sequence:

TGGGTCTGAGTC

Flanking Amino Acid:

EEPLQLNRGVRHSQDQCSGE

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.1

61.6

37.3

Major BPS

49.8

-0

1.7

51.1

46.3

Major PPT

70.1

0.45

0.9

40.2

Minor 5ss

34.5

-1.8

3.5

48.6

42.2

Minor BPS

-0.4

1.7

51.2

40.3

Associated Gene:

Gene:

CHRDL2

Ensembl Gene ID:

ENSAPLG00000005779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045149

201523393 - 201545005

21613

ENSAPLT00000036039

201521773 - 201545005

23233

ENSAPLT00000005980

201523393 - 201539711

16319