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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201535410_201537987_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201535410 - 201537987

Intron Length:

2578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

AATTAATAAACT

Flanking Amino Acid:

VDGKCCKICPETRVKPTDEI

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.6

39.1

Major BPS

0.82

0.8

24.9

Major PPT

76.8

0.6

0.8

68.6

37.3

Minor 5ss

-2.2

3.3

40.9

45.3

Minor BPS

0.08

2.1

74.29

41.7

Associated Gene:

Gene:

CHRDL2

Ensembl Gene ID:

ENSAPLG00000005779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045149

201523393 - 201545005

21613

ENSAPLT00000036039

201521773 - 201545005

23233

ENSAPLT00000005980

201523393 - 201539711

16319