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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201538171_201539397_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201538171 - 201539397

Intron Length:

1227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACACAG

U12 Branch Point Sequence:

TTGTCCCCGAGG

Flanking Amino Acid:

VEIYNWKLIKEGSVTIGKEH

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

44.9

-0.3

1.4

52.7

34.2

Major PPT

80.1

0.68

77.1

37.1

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

44.6

-0.5

2.2

55.63

45.7

Associated Gene:

Gene:

CHRDL2

Ensembl Gene ID:

ENSAPLG00000005779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005980

201523393 - 201539711

16319