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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201538171_201542206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201538171 - 201542206

Intron Length:

4036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

TGGCCCTTTAGG

Flanking Amino Acid:

VEIYNWKLIKGIFHLIQTKK

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

89.7

0.89

0.6

85.1

22.4

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

47.9

-0.3

53.84

46.5

Associated Gene:

Gene:

CHRDL2

Ensembl Gene ID:

ENSAPLG00000005779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045149

201523393 - 201545005

21613

ENSAPLT00000036039

201521773 - 201545005

23233