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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201542300_201543925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201542300 - 201543925

Intron Length:

1626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGAAA

5'SS Class:

major

3'SS Sequence:

TCTGCTCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TGGGTGCTAACG

Flanking Amino Acid:

NFRLITRMDEGHWNIFRAQT

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

68.2

38.4

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

0.65

0.8

69.8

36.7

Minor 5ss

29.5

-2.3

3.4

38.5

46.8

Minor BPS

41.4

-0.7

2.3

47.86

45.5

Associated Gene:

Gene:

CHRDL2

Ensembl Gene ID:

ENSAPLG00000005779

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036039

201521773 - 201545005

23233

ENSAPLT00000045149

201523393 - 201545005

21613