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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201559259_201562516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201559259 - 201562516

Intron Length:

3258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTAATCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAA

U12 Branch Point Sequence:

TCTCTTTTAATC

Flanking Amino Acid:

MFVDEEEGCMVTEKVYESES

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.4

45.1

Major BPS

74.9

0.62

67.3

39.2

Major PPT

76.9

0.6

0.9

77.8

34.3

Minor 5ss

35.1

-1.7

3.2

40.3

45.3

Minor BPS

67.9

0.54

1.2

70.66

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005428

201557975 - 201584363

26389