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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201563432_201568690_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201563432 - 201568690

Intron Length:

5259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTTCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATCAA

U12 Branch Point Sequence:

GTGCTATCAAGA

Flanking Amino Acid:

QLESDSSDEEVNVPLSPTPE

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

71.9

31.5

Major BPS

66.7

0.42

1.1

69.7

35.6

Major PPT

77.9

0.63

0.8

31.7

Minor 5ss

30.1

-2.3

3.4

40.8

45.7

Minor BPS

42.3

-0.5

1.9

50.77

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005428

201557975 - 201584363

26389