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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201578805_201581138_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201578805 - 201581138

Intron Length:

2334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TATTTTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TATTTTTTTACA

Flanking Amino Acid:

AGNIIQNGHVCHKVAVVRED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

81.7

31.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

92.5

0.96

0.7

87.8

29.2

Minor 5ss

38.8

-1.3

57.3

41.2

Minor BPS

65.9

0.49

1.6

75.62

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005428

201557975 - 201584363

26389