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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201583037_201584303_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201583037 - 201584303

Intron Length:

1267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAG

U12 Branch Point Sequence:

GTTTTCTTAGTT

Flanking Amino Acid:

DEFVTDQNRVVTYKWLSYTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

67.5

0.43

1.5

65.7

43.2

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

70.3

0.72

1.5

84.31

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005428

201557975 - 201584363

26389