Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_201681277_201682040_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201681277 - 201682040

Intron Length:

764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGATG

5'SS Class:

major

3'SS Sequence:

CTTTCTGTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

CACGCATTAATA

Flanking Amino Acid:

QKVAGVTYGESSDFGLHTLE

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

66.4

44.6

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

81.1

0.7

0.8

76.8

31.9

Minor 5ss

34.9

-1.7

3.4

48.5

47.3

Minor BPS

50.6

0.01

1.7

57.13

42.6

Associated Gene:

Gene:

SLCO2B1

Ensembl Gene ID:

ENSAPLG00000003485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003603

201674302 - 201709590

35289