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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201700091_201701337_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
201700091 - 201701337

Intron Length:
1247

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTAGGTACT

5'SS Class:
major

3'SS Sequence:
CTTGTCCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTTAC

U12 Branch Point Sequence:
AGCCCCTCAGAC

Flanking Amino Acid:
GPYEYDQSIASMFSNTTDLC

Intron Amino Acid Position:
128

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.7
0.44
1.1
69.4
41.2

Major BPS
68.9
0.47
1
59.6
38.6

Major PPT
75.9
0.58
0.8
69.8
31

Minor 5ss
39.2
-1.2
3.1
57.5
40.7

Minor BPS
43.9
-0.4
1.8
49.25
40.1

Associated Gene:

Gene:
SLCO2B1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

201674302 - 201709590
35289