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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201701780_201709486_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201701780 - 201709486

Intron Length:

7707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATACC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACCAT

U12 Branch Point Sequence:

TTTGTCTTGGCA

Flanking Amino Acid:

LCRNPFLSIKFFVFCHGLLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

81.2

30.6

Major BPS

57.8

0.19

1.3

67.1

39.2

Major PPT

79.9

0.67

77.1

37.1

Minor 5ss

36.4

-1.5

2.8

46.5

41.8

Minor BPS

45.6

-0.3

3.5

73.38

Associated Gene:

Gene:

SLCO2B1

Ensembl Gene ID:

ENSAPLG00000003485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003603

201674302 - 201709590

35289