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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20173396_20177597_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20173396 - 20177597

Intron Length:

4202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

ATTCCACTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

TTGTCTGGAATT

Flanking Amino Acid:

KLVLNPSAININFNLILLIL

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

80.5

27.7

Major BPS

69.1

0.48

32.1

Major PPT

0.4

62.3

38.3

Minor 5ss

42.9

-0.8

2.8

57.1

40.8

Minor BPS

52.3

0.15

2.1

76.18

41.3

Associated Gene:

Gene:

MLC1

Ensembl Gene ID:

ENSAPLG00000016154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034625

20165113 - 20183258

18146

ENSAPLT00000026583

20165113 - 20182875

17763