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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201755292_201756346_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201755292 - 201756346

Intron Length:

1055

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCGCAT

5'SS Class:

major

3'SS Sequence:

TTTGTCCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAACAT

U12 Branch Point Sequence:

TCGCCATGAACA

Flanking Amino Acid:

EAQCKALFGKAAQRAPLSCF

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.3

60.5

45.8

Major BPS

55.8

0.15

1.3

63.4

42.8

Major PPT

0.77

0.8

78.1

30.7

Minor 5ss

36.6

-1.5

3.7

55.3

48.9

Minor BPS

51.7

0.05

1.8

63.22

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039737

201749158 - 201762873

13716

ENSAPLT00000005526

201749158 - 201764321

15164