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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201756453_201757204_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201756453 - 201757204

Intron Length:

752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CTGTCTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

CTTGCAGCATCC

Flanking Amino Acid:

NGTYYTKCQEENILCGRVQC

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

37.2

Major BPS

77.5

0.68

79.6

Major PPT

75.1

0.56

0.9

73.1

37.3

Minor 5ss

29.8

-2.3

3.1

32.5

35.7

Minor BPS

36.9

-1

2.4

51.26

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039737

201749158 - 201762873

13716

ENSAPLT00000005526

201749158 - 201764321

15164