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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201757389_201758460_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

201757389 - 201758460

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCCATG

5'SS Class:

weak_major

3'SS Sequence:

TCTCCTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

CTTTCTGCAATA

Flanking Amino Acid:

KDGTSCGRNKICINRTCVSA

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.3

63.8

47.8

Major BPS

65.7

0.39

71.3

30.3

Major PPT

85.4

0.8

0.7

80.4

24.8

Minor 5ss

47.5

-0.2

2.9

66.1

Minor BPS

49.1

-0

2.2

66.76

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039737

201749158 - 201762873

13716

ENSAPLT00000005526

201749158 - 201764321

15164