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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_201764613_201764704_R

Intron Information:

Intron Rank:
145392
Intron Class:
major
Intron Phase:
Intron Coordinates:
201764613 - 201764704
Intron Length:
92

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GGG|GTGATTATT
5'SS Class:
major
3'SS Sequence:
TCACCTTCTCCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AATAAAT
U12 Branch Point Sequence:
TTTCTCTCACCT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
75.7
0.61
1
79.8
35.1
Major BPS
65.7
0.39
1
71.3
30.3
Major PPT
77.8
0.62
0.8
69.2
36.7
Minor 5ss
35.9
-1.6
2.9
43.2
43.9
Minor BPS
58.4
0.34
1.8
81.4
40.1

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000025622
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000022779
201764342 - 201765332
991