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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201776757_201777674_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201776757 - 201777674

Intron Length:

918

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

CTCTTCTCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGAAT

U12 Branch Point Sequence:

CTCTTCTCACCA

Flanking Amino Acid:

VFILLHEPDTHIREKAVREL

Intron Amino Acid Position:

1419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

73.4

32.4

Major BPS

59.5

0.24

1.5

69.7

44.2

Major PPT

76.5

0.6

0.8

70.2

35.1

Minor 5ss

31.8

-2.1

2.7

38.8

40.3

Minor BPS

49.8

-0

1.9

62.43

44.3

Associated Gene:

Gene:

NUP98

Ensembl Gene ID:

ENSAPLG00000012135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012679

201776207 - 201804275

28069

ENSAPLT00000042210

201776207 - 201804275

28069

ENSAPLT00000018106

201776207 - 201804275

28069