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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20177700_20177797_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20177700 - 20177797

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

AACTGTTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

CTTTCTGAAACT

Flanking Amino Acid:

FAIARNKINVIPNFQILFVS

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.93

0.8

83.5

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

0.59

0.9

68.6

41.3

Minor 5ss

39.5

-1.2

2.8

48.4

41.7

Minor BPS

52.6

0.16

2.3

78.9

Associated Gene:

Gene:

MLC1

Ensembl Gene ID:

ENSAPLG00000016154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034625

20165113 - 20183258

18146

ENSAPLT00000026583

20165113 - 20182875

17763