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Intron Name: Anas_platyrhynchos_platyrhynchos_1_20177852_20179699_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20177852 - 20179699

Intron Length:

1848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGCATT

5'SS Class:

major

3'SS Sequence:

TTAATTTTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TCTCTCTTAATT

Flanking Amino Acid:

MDYLRCAAGSCIPSAVVSFA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

75.9

39.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

81.1

0.7

0.9

76.1

37.6

Minor 5ss

47.5

-0.2

2.9

72.4

Minor BPS

76.3

0.9

1.1

84.73

36.1

Associated Gene:

Gene:

MLC1

Ensembl Gene ID:

ENSAPLG00000016154

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026583

20165113 - 20182875

17763

ENSAPLT00000016862

20165113 - 20182656

17544

ENSAPLT00000034625

20165113 - 20183258

18146