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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201780194_201780774_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201780194 - 201780774

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAG

U12 Branch Point Sequence:

GCCGTGTCAGCG

Flanking Amino Acid:

GEACRLAQQSGDHRLALLLS

Intron Amino Acid Position:

1197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

47.3

-0.1

1.7

57.1

49.4

Major PPT

81.6

0.71

0.8

32.4

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

33.9

-1.3

2.1

30.98

41.5

Associated Gene:

Gene:

NUP98

Ensembl Gene ID:

ENSAPLG00000012135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012679

201776207 - 201804275

28069

ENSAPLT00000042210

201776207 - 201804275

28069

ENSAPLT00000018106

201776207 - 201804275

28069