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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201781568_201782206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201781568 - 201782206

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

CTTTCTGCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAG

U12 Branch Point Sequence:

GCATTGCTACCT

Flanking Amino Acid:

GFLPAPVAPKLLSESSFKVH

Intron Amino Acid Position:

1030

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

70.9

39.2

Major BPS

59.4

0.23

1.5

69.4

37.7

Major PPT

81.4

0.71

0.8

73.2

37.3

Minor 5ss

38.7

-1.3

2.8

51.8

39.1

Minor BPS

40.3

-0.6

2.4

57.42

45.2

Associated Gene:

Gene:

NUP98

Ensembl Gene ID:

ENSAPLG00000012135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012679

201776207 - 201804275

28069

ENSAPLT00000042210

201776207 - 201804275

28069

ENSAPLT00000018106

201776207 - 201804275

28069