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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201784499_201788451_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201784499 - 201788451

Intron Length:

3953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAGGA

5'SS Class:

major

3'SS Sequence:

CATGTGTCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

TTTGTCTGACGT

Flanking Amino Acid:

LNGKPTPPSQTPEVEQLGRV

Intron Amino Acid Position:

780

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

59.4

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

68.6

0.42

61.5

39.7

Minor 5ss

27.8

-2.6

3.6

38.3

46.7

Minor BPS

47.4

-0.1

2.1

71.74

45.4

Associated Gene:

Gene:

NUP98

Ensembl Gene ID:

ENSAPLG00000012135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012679

201776207 - 201804275

28069

ENSAPLT00000018106

201776207 - 201804275

28069