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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201789105_201789390_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201789105 - 201789390

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATTTAA

5'SS Class:

strong_major

3'SS Sequence:

CCATCTTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CCATCTTTAACA

Flanking Amino Acid:

RKPPIGEGLNRRAEVTLDGV

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.1

25.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

73.2

0.52

0.9

68.7

35.7

Minor 5ss

39.6

-1.2

2.8

49.5

46.6

Minor BPS

0.72

1.2

71.6

40.9

Associated Gene:

Gene:

NUP98

Ensembl Gene ID:

ENSAPLG00000012135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012679

201776207 - 201804275

28069

ENSAPLT00000042210

201776207 - 201804275

28069

ENSAPLT00000018106

201776207 - 201804275

28069