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Intron Name: Anas_platyrhynchos_platyrhynchos_1_201793752_201795116_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

201793752 - 201795116

Intron Length:

1365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGGAA

U12 Branch Point Sequence:

GAAACTCGAATT

Flanking Amino Acid:

PMSDPKKKEERLKPTNPAAQ

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

54.5

0.11

1.4

55.4

Major PPT

79.2

0.66

0.9

75.9

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

44.9

-0.3

1.7

57.75

38.4

Associated Gene:

Gene:

NUP98

Ensembl Gene ID:

ENSAPLG00000012135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018106

201776207 - 201804275

28069

ENSAPLT00000012679

201776207 - 201804275

28069

ENSAPLT00000042210

201776207 - 201804275

28069